plot,3d,gnuplot,surface,scatter3d , Gnuplot 3D - plot scatter points and a surface *and* lines between the them


Gnuplot 3D - plot scatter points and a surface *and* lines between the them

Question:

Tag: plot,3d,gnuplot,surface,scatter3d

I've been unable to find a way of producing the plot described in the title, does anyone know how to do this if it's possible? I'd like to plot a surface from a function, and plot points from a file, and have lines drawn between the points and the surface. The link below is an image that contains an example of what I'd like to do, taken from a stackoverflow question for an identical task (but for a different plotting program).

Graph example


Answer:

You can do the calculations inside gnuplot's using statement. For the lines I use the vectors plotting style, and with arrowstyle variable (or linecolor variable) you can select different colors depending on the dz value:

set style arrow 1 linecolor rgb 'red' nohead
set style arrow 2 linecolor rgb 'green' nohead

splot f(x,y) with lines, \
    'points.dat' using 1:2:(f($1,$2)):(0):(0):(dz=$3-f($1,$2)):(dz < 0 ? 1 : 2) with vectors arrowstyle variable,\
    '' using 1:2:3 with points pt 7 ps 5

I'm not sure, which this gives problems with gnuplot 4.6. For your case you can also use linecolor variable or linecolor rgb variable to change the color of the vertical lines:

splot f(x,y) with lines, \
    'points.dat' using 1:2:(f($1,$2)):(0):(0):(dz=$3-f($1,$2)):(dz < 0 ? 0xff0000 : 0x00ff00) with vectors nohead linecolor rgb variable lw 5,\
    '' using 1:2:3 with points pt 7 ps 5

Related:


Flot Graph inconstencies with axis and tooltips?


javascript,jquery,plot,flot
I am working on an application where I am trying to plot a similar graph to what is plotted at Open Weather. I am using the FlotJS library to query their API and plot the graphs. Here is my code. I apologize for the verbosity. /* * RUN PAGE GRAPHS...

creating a 3d array in python does not create array correctly


python,arrays,3d
I wish to make a 3d array by appending each element to the array in a loop, but instead of getting a 3d array I just get a 1d array with more elements in it. I'm working in Python 2.7 I want to get labels = [1,34,u'te],[2,44,u've],[4,43,u'ht] My code so...

How to plot columns numbered greater than 1000 in gnuplot


plot,gnuplot
I have a file with 1600 columns. plot "file" using 1:999 title columnhead(999) plots column 999, but plot "file" using 1:1000 title columnhead(1000) produces column 100 instead of 1000, producing the same result as plot "file" using 1:100 title columnhead(100) Apparently large column numbers are wrapped. Is there a work-around...

How to set x-axis with decreasing power values in equal sizes


r,plot,ggplot2,cdf
Currently I am doing some cumulative distribution plot using R and I tried to set x-axis with decreasing power values (such as 10000,1000,100,10,1) in equal sizes but I failed: n<-ceiling(max(test)) qplot(1:n, ecdf(test)(1:n), geom="point",xlab="check-ins", ylab="Pr(X>=x)")+ geom_step() +scale_x_reverse(breaks=c(10000,1000,100,10,1)) +scale_shape_manual(values=c(15,19)) It seems that the output has large interval for 10000, then all the...

Read One Input File and plot multiple


python,numpy,matplotlib,graph,plot
I am trying to read one input file of below format. Where Col[1] is x axis and Col[2] is y axis and col[3] is some name. I need to plot multiple line graphs for separate names of col[3]. Eg: Name sd with x,y values will have one line graph and...

Add a segment of a regression line to a plot


r,plot
I have 4 regression lines and I want to have them in one plot. Here is my simple code: data = read.csv("TEST.csv", header = FALSE) plot(data$V1,data$V2) fit <- lm(data$V2~data$V1) abline(fit, col=1) data1 = read.csv("TEST1.csv", header = FALSE) fit1 <- lm(data1$V2~data1$V1) abline(fit1, col=2) data2 = read.csv("TEST2.csv", header = FALSE) fit2 <-...

How plot a messy random-size circles in MATLAB? [closed]


matlab,plot,matlab-figure
I am going to draw a figure such as below picture in the MATLAB R2014b: . This figure consists of many circles with different (random) colors and random sizes. How is it possible to plot such this figure in MATLAB R2014b?...

“Icon” (ISOTYPE) charts in R shiny with Javascript


javascript,r,plot,statistics,shiny
I'm working on a project to build several models for data analysis and reporting using R and the amazing Shiny framework for web development. I'm getting started with R and Shiny but I've had an amazing experience so far, yet, I'd like to get some help in case someone has...

matlab plots as movie with legend


matlab,plot,legend,movie
i have a question regarding legend for movies. This is my code: fig = figure(); for i = 1: 70000 plot(signal1) hold on; plot([i,i],[-5,5]) plot(signal2,'r') hold off; title('\fontsize{14} my data'); legend('signal1','signal2'); axis tight; f(i) = getframe(fig); end The legend shows the same colors for the first two things I plot....

Add a gap between the second and third series in a Highcharts column plot with four series displayed


javascript,plot,highcharts
I have a Highcharts column plot that shows four series. I would like series one and two to be touching each another (the two blue ones), then have a small gap, and then have series three and four touching each another (the orange ones). Can this be done? I haven't...

making a choropleth from SpatialPolygonsDataFrame- ggplot vs ggplot2 vs plot?


r,plot,ggplot2
I have a shapefile, specifically, a SpatialPolygonsDataFrame, called cdtract. that contains one variable for each district called varcount. varcount is either "NA" or 1. When I do plot(cdtract) ...I see the map printed out but I don't see the tracts that are '1' in varcount marked any differently from those...

How to put several formulas outside of a plot (top) using ggplot2?


r,plot,ggplot2
I have problems using annotation_custom. Here is the dataset: DOSE PROD pH 1 0 CL 4.3550 2 0 CO 4.3250 3 0 CZ 4.1475 4 0 PF 4.2300 5 0 RP 4.1225 6 25 CL 4.3420 7 25 CO 4.3520 8 25 CZ 4.7840 9 25 PF 4.2640 10 25...

Read CSV and plot colored line graph


python,csv,matplotlib,graph,plot
I am trying to plot a graph with colored markers before and after threshold value. If I am using for loop for reading the parsing the input file with time H:M I can plot and color only two points. But for all the points I cannot plot. Input akdj 12:00...

Matplotlib: How to force integer tick labels?


python,matplotlib,plot
My python script uses matplotlib to plot a 2D "heat map" of an x, y, z dataset. My x- and y-values represent amino acid residues in a protein and can therefore only be integers. When I zoom into the plot, it looks like this: As I said, float values on...

Animate through multiple 2D Matlab plots


matlab,plot
I have multiple 2D line plots in Matlab (they represent some wave moving through space). Each plot represents the wave at some time t. I want to animate through these plots (i.e. show the first plot for a fraction of a second, then show the next one, and the next,...

Displaying surface with non-rectangular boundary


matlab,image-processing,plot,3d,surface
Refer to the attached image. I want to display the image in Matlab using the function surf(). However, I only want to display the region of the actual object without the background (the pale-green region surrounding the actual object which has 0 value). How to do that? I tried replacing...

Set categorical axis labels with scales “free” ggplot2


r,plot,ggplot2,facet
I am trying to set the labels on a categorical axis within a faceted plot using the ggplot2 package (1.0.1) in R (3.1.1) with scales="free". If I plot without manually setting the axis tick labels they appear correctly (first plot), but when I try to set the labels (second plot)...

matplotlib mean interval plot


python,pandas,matplotlib,plot
I'm transitioning from R to python, and was looking to plot the mean line of a two variables. It is the plot of the x variable is split into intervals for the x axis, and mean of the y variable for the y axis. For example, if I have 1000...

3D Lines disappear sometimes


javascript,d3.js,3d,three.js
I am building 3d line chart from data here is the code Demo the part of code that generate line is parentTransform = new THREE.Object3D(); var _color = d3.scale.category10(); for (var i = 5; i > 0; i--) { var material = new THREE.LineBasicMaterial({ // color: 0x0000ff,linewidth: 30 color: _color(i),...

Customized back-to-back histogram in R


r,plot,histogram
Given this example of back to back histogram: set.seed (123) xvar <- round (rnorm (100, 54, 10), 0) xyvar <- round (rnorm (100, 54, 10), 0) myd <- data.frame (xvar, xyvar) valut <- as.numeric (cut(c(myd$xvar,myd$xyvar), 12)) myd$xwt <- valut[1:100] myd$xywt <- valut[101:200] xy.pop <- data.frame (table (myd$xywt)) xx.pop <- data.frame...

Plotting Probability Density Heatmap Over Time in R


r,plot,time-series,kriging
Let's say I have the output of a monte-carlo simulation of one variable over several different iterations (think millions). For each iteration, I have the values of the variable at each point in time (ranging from t=1 to t=365). I would like to produce the following plot: For each point...

How colorize Circles in a plot in MATLAB?


matlab,graphics,plot,matlab-figure
I have a MATLAB code as follows: MinVal = -1; MaxVal = 1; MaxRadius = 0.5; nCircles = 5; Dimension = 2; Circles = zeros(nCircles, Dimension); Radius = zeros(nCircles, 1); for i = 1 : nCircles Circles(i,:) = unifrnd(MinVal, MaxVal, [1, Dimension]); Radius(i) = unifrnd(0, MaxRadius, 1); end t =...

R Shiny - set reactive width of a plot output


plot,shiny,reactive-programming,weight
I am filtering a tbale and a heat-map simultaneously. During filtering, the width of the table is changing such that width of particular columns remains the same. Width of the heat-map remains the same during filtering. I want the heat-map to change its weight in the same way as the...

Python: Using panda to import csv. Trying to plot a column but gives me an error saying “no numerical data to plot”


python,csv,pandas,plot
I'm trying to read following csv-file with panda and plot a column of it: data type,approved mining area,mined area,coal content,earth rate,coal rate,waste ratio unit,ha,ha,Mt,Mm3/a,Mt/a, Garzweiler,11400,3096,1246,140,37.5,4.4 Hambach,8500,4224,1500,275,40,5.2 Inden,4500,1655,358,87.5,22.5,3.6 which gives me the following (only a part so it fits here): data type approved mining area mined area coal content earth rate...

Align axis ticks with bins in a lattice histogram


r,plot,lattice
I plotted a histogram using Lattice histogram(~Time |factor(Bila), data=flexi2, xlim= c(5, 15), ylim=c(0, 57), scales=list(x=list(at=seq(5,15,1))), xlab="Time", subset=(Bila%in% c(""))) The bins I get do not match the exact hours, whereas I would like the bin to start at the exact hour, for example, 6,7 etc. I use lattice since I want...

Python: matplotlib - probability mass function as histogram


python,python-2.7,matplotlib,plot,histogram
I want to draw a histogram and a line plot at the same graph. However, to do that I need to have my histogram as a probability mass function, so I want to have on the y-axis a probability values. However, I don't know how to do that, because using...

Plot SpatialPoints “ylim” behaviour incomprehensible


r,plot,sp
I'm trying to plot a SpatialPoints object using the generic function from the Package graphics. The extent of the plot should be exactly the size of the outermost datapoints. Here's a simple example where the ratio of delta x over delta y (outermost values) is 1: library(sp) xydata <- as.matrix(cbind(c(1,1,2,2,1.5),c(1,2,2,1,1.5)))...

Pygame 3D: How to and is it possible?


python,performance,dictionary,3d,pygame
So I want to program a 3d-mesh viewer in pygame, no other 3rd-party modules wanted (panda3d is perfect, but it's very complicated). My idea is: list_of_surfs = {'85 50':'70deg'} #the 85 50 and the dimensions of the #side/surf, and 70 deg of rotation to be able to see it, then...

MATLAB: How to make camera light follow 3D Rotation


matlab,user-interface,3d,rotation,lighting
I have come into a problem recently when trying to rotate 3D objects. I am building a GUI and I have a separate figure where an object is plotted. In the figure, I allow the user to use MATLAB's built-in rotate button to move the object around. However, I am...

How to add shading through all subplot


python,matplotlib,plot
I have a question about add shading in my figure. I need to shading all subplot like the picture below, how to do it in Python?

How to concatenate 3 histograms on the same graph in Matlab


matlab,image-processing,plot,histogram
I have calculated 3 histograms for an rgb image using imhist function in Matlab, one for each channel. I want to plot these histograms on the same graph, where for instance, the histogram for the first (red) channel stretches on the x axis from 0 to 255, the histogram for...

Set label on group multiplot in gnuplot


linux,graph,plot,gnuplot
Im plotting one picture with 4 different graphs using gnuplot. Labels for their x and y axes have the same meaning. If Im plotting it like this: set multiplot layout 2,2 rowsfirst set xlabel "x" set ylabel "y" set title offset -3,-3 set xrange [20:70] set yrange [0:15000] set title...

SAS Gplot overlay line plots


plot,sas
I am trying to plot two sets of line graphs on the same chart: /* make data */ data test ; do i = 1 to 2 ; do x = 1 to 5 ; y = i*x ; z = 0.5*i*x ; output; end ; end ; run ;...

Matplotlib heatmap: Image rotated when heatmap plot over it


python,matplotlib,plot,google-visualization,heatmap
I am trying to plot a heatmap on top of an image. What I did: import matplotlib.pyplot as plt import numpy as np import numpy.random import urllib #downloading an example image urllib.urlretrieve("http://tekeye.biz/wp-content/uploads/2013/01/small_playing_cards.png", "/tmp/cards.png") #reading and plotting the image im = plt.imread('/tmp/cards.png') implot = plt.imshow(im) #generating random data for the histogram...

Putting space between bars using bar function


matlab,plot,bar-chart
I am try to plot 16 bars, 8 of these belong to one group. I want to give this group the red color, the other 8 belong to another group which is given the blue color. I would like to arrange the bar in pairs, each pair containing one from...

MATLAB - How to merge figure sections vertically


matlab,plot
I want to display three figures in a figure window. Assuming that I divide 2x2 regions. subplot(2,2,1) ---------+----------- | R1 | R2 | ---------+----------- | R3 | R4 | ---------+----------- I want to show a figure merging R1 and R3 ant other two in R2 and R4 I can display...

Plotting random signal on circle


matlab,plot,signals,circle
I have some random signal (for example sin signal) with the time scale. t=0:0.1:2*pi y=sin(t) plot(t,y) Now I want to draw this signal on this circle. So the time vector actually becomes an envelope of the circle. Envelope of the circle represents "y = 0" in cartesian coordinate system. Here...

Plotting two different arrays of different lengths


python,numpy,matplotlib,plot
I have two arrays. One is the raw signal of length (1000, ) and the other one is the smooth signal of length (100,). I want to visually represent how the smooth signal represents the raw signal. Since these arrays are of different length, I am not able to plot...

R: Multible line in a plot using curveid


r,plot
I'm researcher and not a programmer. I have often used the drc package, to analyze data. There you can define a curveid and it will plot multiple lines in one plot. I need the same thing just for the normal plot, but obviously is my knowledge to little to do...

Object-oriented access to fill_between shaded region in matplotlib


python,matplotlib,plot,fill
I'm trying to get access to the shaded region of a matplotlib plot, so that I can remove it without doing plt.cla() [since cla() clears the whole axis including axis label too] If I were plotting I line, I could do: import matplotlib.pyplot as plt ax = plt.gca() ax.plot(x,y) ax.set_xlabel('My...

How to rotate an image R raster


r,plot,rotation,raster
I have code below which saves an image to my pc. I would like to rotate that image by 45,90 and 135 degrees around its center (or bottom left hand corner) and then save as 3 different images. How could I do that? library(raster) r1 <- brick(system.file("external/rlogo.grd", package="raster")) x <-...

Matlab - plot bar and line graph on the same y axis


matlab,plot,line
I'm trying to plot a line graph and a bar graph on the same y-axis: figure; plotyy(Pert, Rfootvel(:,i+1), Pert, 0,'bar','plot'); hold(ax(1), 'on'); legend('Pert 1-8', 'Base'); ylim(ax(2), [0 1]); title(['The avg pert velocity of the first step vs the avg base velocity, PP' num2str(j)]); Unfortunately, setting the second y-axis limit like...

How to calculate a random point inside a cube


math,vector,3d,cube
I'm trying to figure out the math to find a random point inside a cube. I have something small but it can't take into account the rotation of the cube. Here are some images of my results. Here you can see the cube is rotated to some degree but when...

gnuplot highlighting points when with lines


plot,gnuplot,highlight
I have 4 points I would like to plot using gnuplot, but with lines. The problem is, I can't find how to highlight these 4 points on the drawn line. I would like for the plot to be a line through the points, but that these points are also clearly...

how can i plot a route map?


javascript,google-maps,plot
I am writing a simple application to plot multiple marker in the google map and connect it thought a path as it looks like a route . I can plot multiple marker . and search some article which plot the route map . but i can not plot it ....

Shift Plot Data Along X Axis Matlab


matlab,plot,axis,shift
I cannot get Matlab to plot a a second time series to specific points along the x axis. My data are two time series. Time series A is a 5 X 1 and time series B is a 7 X 1. I need A to plot on xticklabels 1-5. Then,...

Matplotlib: Plot the result of an SQL query


python,sql,matplotlib,plot
from sqlalchemy import create_engine import _mssql from matplotlib import pyplot as plt engine = create_engine('mssql+pymssql://**:****@127.0.0.1:1433/AffectV_Test') connection = engine.connect() result = connection.execute('SELECT Campaign_id, SUM(Count) AS Total_Count FROM Impressions GROUP BY Campaign_id') for row in result: print row connection.close() The above code generates an array: (54ca686d0189607081dbda85', 4174469) (551c21150189601fb08b6b64', 182) (552391ee0189601fb08b6b73', 237304) (5469f3ec0189606b1b25bcc0',...

rCharts doesn't render the plot in shiny app


r,plot,shiny,rcharts
I am using following simple shiny app code snippet to plot the output in the main pannel. But it doesn't render the plot as expected. It shows nothing in the browser. But When i run only the mPlot portion, it displays the plot in RStudio correctly with all interactions. ui.R...

How to switch Matlab plot tick labels to scientific form?


matlab,plot
I have a semilogarithmic plot which works so far with semilogx. Now I would like to change the tick labels. Now it says 10^8 10^9 ... 10^13, but I would like to see 1e8, 1e9, ... 1e13 on the x-axis. How can I change that? Cheers Manuel...

Align bars in ciplot


plot,stata
I'm working with the ciplot graphing module for Stata and am encountering a problem with the alignment of bars when I use the by() option. Here's a trivial example demonstrating the issue: webuse citytemp, clear ciplot heatdd cooldd, by(region) horizontal recast(conn) So, the graph shows means and confidence intervals for...